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DTDs at
Bioxml
Current dtds: game2.ent - This is where the basic elements and entities are defined. For more info, see the WikiDocs.seq.dtd - The basic sequence dtd. - This This is very simple and represents either a sequence or a link to a a sequence file in a database. computational_analysis.dtd- A feature-wrapper which allows the representation of analysis which give results in the form of sequence features, like alignment programs and genomic analysis programs. annotation.dtd
- A feature-wrapper for human expert-specified sequence features.
This uses an evidence tag to refer to computations and database cross-references
(using the link dtd). game.dtd - A wrapper dtd which incorporates sequences, computations and annotations. Here is a Genbank dtd submitted by Michael Driscoll and a perl script for parsing genbank flat files. Also check out our
stylesheets and
parsers. |